Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-513b in SMCL Lung Bhattacharjee Cluster 18 Table contains all genes in the SMCL Lung Bhattacharjee cluster number 18. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-513b 9049 AIP aryl hydrocarbon receptor interacting protein [Source:HGNC Symbol;Acc:358] zzz999 4204 MECP2 methyl CpG binding protein 2 (Rett syndrome) [Source:HGNC Symbol;Acc:6990] T 6184 RPN1 ribophorin I [Source:HGNC Symbol;Acc:10381] zzz999 91289 LMF2 lipase maturation factor 2 [Source:HGNC Symbol;Acc:25096] zzz999 7027 TFDP1 transcription factor Dp-1 [Source:HGNC Symbol;Acc:11749] zzz999 26003 GORASP2 golgi reassembly stacking protein 2, 55kDa [Source:HGNC Symbol;Acc:17500] zzz999 55737 VPS35 vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:13487] P T 1975 EIF4B eukaryotic translation initiation factor 4B [Source:HGNC Symbol;Acc:3285] zzz999 8776 MTMR1 myotubularin related protein 1 [Source:HGNC Symbol;Acc:7449] zzz999 6904 TBCD tubulin folding cofactor D [Source:HGNC Symbol;Acc:11581] zzz999 8575 PRKRA protein kinase, interferon-inducible double stranded RNA dependent activator [Source:HGNC Symbol;Acc:9438] T 23094 SIPA1L3 signal-induced proliferation-associated 1 like 3 [Source:HGNC Symbol;Acc:23801] zzz999 5501 PPP1CC protein phosphatase 1, catalytic subunit, gamma isozyme [Source:HGNC Symbol;Acc:9283] zzz999 23367 LARP1 La ribonucleoprotein domain family, member 1 [Source:HGNC Symbol;Acc:29531] zzz999 253635 CCDC75 coiled-coil domain containing 75 [Source:HGNC Symbol;Acc:26768] zzz999 7334 UBE2N ubiquitin-conjugating enzyme E2N (UBC13 homolog, yeast) [Source:HGNC Symbol;Acc:12492] P T 3251 HPRT1 hypoxanthine phosphoribosyltransferase 1 [Source:HGNC Symbol;Acc:5157] zzz999 10123 ARL4C ADP-ribosylation factor-like 4C [Source:HGNC Symbol;Acc:698] zzz999 56650 CLDND1 claudin domain containing 1 [Source:HGNC Symbol;Acc:1322] zzz999 4318 MMP9 matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase) [Source:HGNC Symbol;Acc:7176] zzz999 201562 PTPLB protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b [Source:HGNC Symbol;Acc:9640] zzz999 8664 EIF3D eukaryotic translation initiation factor 3, subunit D [Source:HGNC Symbol;Acc:3278] zzz999 6478 SIAH2 seven in absentia homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:10858] zzz999 5352 PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:HGNC Symbol;Acc:9082] zzz999 53615 MBD3 methyl-CpG binding domain protein 3 [Source:HGNC Symbol;Acc:6918] zzz999 10042 HMGXB4 HMG box domain containing 4 [Source:HGNC Symbol;Acc:5003] zzz999 26053 AUTS2 autism susceptibility candidate 2 [Source:HGNC Symbol;Acc:14262] T 9589 WTAP Wilms tumor 1 associated protein [Source:HGNC Symbol;Acc:16846] zzz999 23259 DDHD2 DDHD domain containing 2 [Source:HGNC Symbol;Acc:29106] zzz999 6670 SP3 Sp3 transcription factor [Source:HGNC Symbol;Acc:11208] zzz999 6574 SLC20A1 solute carrier family 20 (phosphate transporter), member 1 [Source:HGNC Symbol;Acc:10946] T 2870 GRK6 G protein-coupled receptor kinase 6 [Source:HGNC Symbol;Acc:4545] zzz999 23640 HSPBP1 HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 [Source:HGNC Symbol;Acc:24989] zzz999 7474 WNT5A wingless-type MMTV integration site family, member 5A [Source:HGNC Symbol;Acc:12784] zzz999 926 CD8B CD8b molecule [Source:HGNC Symbol;Acc:1707] zzz999 156 ADRBK1 adrenergic, beta, receptor kinase 1 [Source:HGNC Symbol;Acc:289] zzz999 1017 CDK2 cyclin-dependent kinase 2 [Source:HGNC Symbol;Acc:1771] zzz999 541578 CXorf40B chromosome X open reading frame 40B [Source:HGNC Symbol;Acc:17402] zzz999 4793 NFKBIB nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta [Source:HGNC Symbol;Acc:7798] zzz999 23020 SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) [Source:HGNC Symbol;Acc:30859] zzz999 4171 MCM2 minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:6944] zzz999 3930 LBR lamin B receptor [Source:HGNC Symbol;Acc:6518] T 6613 SUMO2 SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:11125] zzz999 8237 USP11 ubiquitin specific peptidase 11 [Source:HGNC Symbol;Acc:12609] zzz999 146 ADRA1D adrenergic, alpha-1D-, receptor [Source:HGNC Symbol;Acc:280] zzz999 5986 RFNG RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:9974] zzz999 30968 STOML2 stomatin (EPB72)-like 2 [Source:HGNC Symbol;Acc:14559] zzz999 22887 FOXJ3 forkhead box J3 [Source:HGNC Symbol;Acc:29178] zzz999 2290 FOXG1 forkhead box G1 [Source:HGNC Symbol;Acc:3811] zzz999 7341 SUMO1 SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:12502] zzz999 8450 CUL4B cullin 4B [Source:HGNC Symbol;Acc:2555] zzz999 5927 KDM5A lysine (K)-specific demethylase 5A [Source:HGNC Symbol;Acc:9886] zzz999 9868 TOMM70A translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:11985] T 23360 FNBP4 formin binding protein 4 [Source:HGNC Symbol;Acc:19752] T 2043 EPHA4 EPH receptor A4 [Source:HGNC Symbol;Acc:3388] zzz999 23133 PHF8 PHD finger protein 8 [Source:HGNC Symbol;Acc:20672] T 29799 YPEL1 yippee-like 1 (Drosophila) [Source:HGNC Symbol;Acc:12845] T 2534 FYN FYN oncogene related to SRC, FGR, YES [Source:HGNC Symbol;Acc:4037] zzz999 440093 H3F3C H3 histone, family 3C [Source:HGNC Symbol;Acc:33164] zzz999 6611 SMS spermine synthase [Source:HGNC Symbol;Acc:11123] T 1993 ELAVL2 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) [Source:HGNC Symbol;Acc:3313] zzz999 23623 RUSC1 RUN and SH3 domain containing 1 [Source:HGNC Symbol;Acc:17153] zzz999 9070 ASH2L ash2 (absent, small, or homeotic)-like (Drosophila) [Source:HGNC Symbol;Acc:744] T

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